orangeSi
myth
5 repositories
China,GuangZhou Reforgene
bioinformatic bird flying in microbial genomics of BGI ShenZhen in China

tinypandas

easy-to-use data structures and data analysis tools ( still be in draft, inspired by Python Pandas )

crystal crystal-lang csv dataframe pandas-python vcf
  • 10
  • 2
  • 0
  • 0
  • 0
  • over 3 years ago

bam2msa

convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region

crystal-lang bioinformatics alignment bam msa pairwise-alignment
  • 10
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  • 1
  • 0
  • 0
  • about 1 year ago

biokits

bioinformatics tools

bioinformatics fasta
  • 4
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  • 1
  • over 1 year ago

grepfile

a alternative for $grep -f A.list B.list which cost too many memory and time

ruby crystal-lang regex grep-like
  • 4
  • 0
  • 0
  • 0
  • 0
  • over 2 years ago

rr

a simple bookmark tool by crystal-lang in command line of terminal for lazy guy in Linux

cli crystal-language todolist terminal-based bookmarks cmdline-linux keyword-match regexp-match
  • 3
  • 0
  • 0
  • 0
  • 0
  • about 4 years ago