orangeSi
myth
5 repositories
China,GuangZhou Reforgene
bioinformatic bird flying in microbial genomics of BGI ShenZhen in China

bam2msa

convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region

crystal-lang bioinformatics alignment bam msa pairwise-alignment
  • 11
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  • 1
  • 0
  • 0
  • 6 months ago

tinypandas

easy-to-use data structures and data analysis tools ( still be in draft, inspired by Python Pandas )

crystal crystal-lang csv dataframe pandas-python vcf
  • 9
  • 2
  • 0
  • 0
  • 0
  • about 4 years ago

biokits

bioinformatics tools

bioinformatics fasta
  • 4
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  • 1
  • about 2 years ago

grepfile

a alternative for $grep -f A.list B.list which cost too many memory and time

ruby crystal-lang regex grep-like
  • 4
  • 0
  • 0
  • 0
  • 0
  • about 3 years ago

rr

a simple bookmark tool by crystal-lang in command line of terminal for lazy guy in Linux

cli crystal-language todolist terminal-based bookmarks cmdline-linux keyword-match regexp-match
  • 3
  • 0
  • 0
  • 0
  • 0
  • almost 5 years ago